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BDBM464562

E3L019511
Internal ID: BDB019511
Activity data available Local docking-ready structure
Dock with O75530
Structure
/e3_file/ligand_db/generated/BDB019511/BDB019511.sdf
Basic Properties
Compound ID
E3L019511
Internal ID
BDB019511
Molecular formula
C32H36N6O6S
Molecular weight
632.743000
Exact mass
632.241704
XLogP
3.0404
TPSA
158.6500
HBA / HBD
9 / 4
Rotatable bonds
10
Heavy atoms / rings
45 / 6
Activity summary
IC50 unknown 5.00000000 nM
1 activity record(s) imported
InChIKey
WAKNXLQHJPZLOV-UHFFFAOYSA-N
SMILES
C=CCC1(S(=O)(=O)n2cc(O)c3c(C(=O)NCc4c(OC)cc(C)[nH]c4=O)cc(-c4ccc(N5CCNCC5)nc4)cc32)CC1
Aliases
BDBM464562 (preferred) 3-hydroxy-N-[(4-methoxy-6-methyl-2-oxo-1H-pyridin-3-yl)methyl]-6-(6-piperazin-1-yl-3-pyridinyl)-1-(1-prop-2-enylcyclopropyl)sulfonylindole-4-carboxamide (source_name) BDBM464562 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
O75530 EED
Polycomb protein EED		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM464562 medium
; target=Histone-lysine N-methyltransferase EZH2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM464562 Open - 10.7270/Q26113DT
PubChem CID172636620 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready C=CCC1(S(=O)(=O)n2cc(O)c3c(C(=O)NCc4c(OC)cc(C)[nH]c4=O)cc(-c4ccc(N5CCNCC5)nc4)cc32)CC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB019511/BDB019511.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB019511/BDB019511.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB019511/BDB019511.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB019511/BDB019511.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB019511/BDB019511.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Histone-lysine N-methyltransferase EZH2
O75530
E3 ligase component 		BindingDB:BDBM464562 IC50 5 nM Very high DOI: 10.7270/Q26113DT 1