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US10807959, Example 68

E3L019638
Internal ID: BDB019638
Activity data available Local docking-ready structure
Dock with P61964
Structure
/e3_file/ligand_db/generated/BDB019638/BDB019638.sdf
Basic Properties
Compound ID
E3L019638
Internal ID
BDB019638
Molecular formula
C27H24ClF4N3O
Molecular weight
517.954000
Exact mass
517.154403
XLogP
6.6852
TPSA
53.4900
HBA / HBD
3 / 2
Rotatable bonds
6
Heavy atoms / rings
36 / 4
Activity summary
Ki unknown 0.30000000 nM
1 activity record(s) imported
InChIKey
BYXOHNUQRNOQBC-UHFFFAOYSA-N
SMILES
Cc1cc(CNC(=O)c2cc(CNC3=NCCC3)cc(-c3ccc(F)cc3C(F)(F)F)c2)ccc1Cl
Aliases
BDBM468798 (preferred) US10807959, Example 68 (source_name) BDBM468798 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P61964 WDR5;BIG3
WD repeat-containing protein 5
reported_binder bindingdb_reported Yes No low BindingDB:BDBM468798 medium
; target=WD repeat-containing protein 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM468798 Open - 10.7270/Q26Q219X
PubChem CID146371228 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1cc(CNC(=O)c2cc(CNC3=NCCC3)cc(-c3ccc(F)cc3C(F)(F)F)c2)ccc1Cl keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB019638/BDB019638.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB019638/BDB019638.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB019638/BDB019638.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB019638/BDB019638.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB019638/BDB019638.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 5
P61964
E3 ligase component
BindingDB:BDBM468798 Ki 0.3 nM Very high DOI: 10.7270/Q26Q219X 1