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US10807959, Example 69

E3L019639
Internal ID: BDB019639
Activity data available Local docking-ready structure
Dock with P61964
Structure
/e3_file/ligand_db/generated/BDB019639/BDB019639.sdf
Basic Properties
Compound ID
E3L019639
Internal ID
BDB019639
Molecular formula
C28H29ClFN3O2
Molecular weight
494.010000
Exact mass
493.193233
XLogP
5.9834
TPSA
62.7200
HBA / HBD
4 / 2
Rotatable bonds
7
Heavy atoms / rings
35 / 4
Activity summary
Ki unknown 1.30000000 nM
1 activity record(s) imported
InChIKey
GPEQTZRNLVAVIJ-UHFFFAOYSA-N
SMILES
COc1cc(F)c(C)cc1-c1cc(CNC2=NCCC2)cc(C(=O)NCc2ccc(Cl)c(C)c2)c1
Aliases
BDBM468799 (preferred) US10807959, Example 69 (source_name) BDBM468799 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P61964 WDR5;BIG3
WD repeat-containing protein 5
reported_binder bindingdb_reported Yes No low BindingDB:BDBM468799 medium
; target=WD repeat-containing protein 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM468799 Open - 10.7270/Q26Q219X
PubChem CID146370853 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COc1cc(F)c(C)cc1-c1cc(CNC2=NCCC2)cc(C(=O)NCc2ccc(Cl)c(C)c2)c1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB019639/BDB019639.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB019639/BDB019639.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB019639/BDB019639.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB019639/BDB019639.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB019639/BDB019639.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 5
P61964
E3 ligase component
BindingDB:BDBM468799 Ki 1.3 nM Very high DOI: 10.7270/Q26Q219X 1