< Back to small molecule database

US10807959, Example 86

E3L019656
Internal ID: BDB019656
Activity data available Local docking-ready structure
Dock with P61964
Structure
/e3_file/ligand_db/generated/BDB019656/BDB019656.sdf
Basic Properties
Compound ID
E3L019656
Internal ID
BDB019656
Molecular formula
C23H21Cl3N6O2
Molecular weight
519.820000
Exact mass
518.079157
XLogP
4.0912
TPSA
100.5300
HBA / HBD
7 / 3
Rotatable bonds
7
Heavy atoms / rings
34 / 4
Activity summary
Ki < 0.10000000 nM
1 activity record(s) imported
InChIKey
PVZXKTDNVPKVTN-UHFFFAOYSA-N
SMILES
COc1ncc(Cl)cc1-c1cc(CNC2=NCCN2)cc(C(=O)NCc2ccc(Cl)c(Cl)c2)n1
Aliases
BDBM468816 (preferred) US10807959, Example 86 (source_name) BDBM468816 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P61964 WDR5;BIG3
WD repeat-containing protein 5
reported_binder bindingdb_reported Yes No low BindingDB:BDBM468816 medium
; target=WD repeat-containing protein 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM468816 Open - 10.7270/Q26Q219X
PubChem CID146370958 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COc1ncc(Cl)cc1-c1cc(CNC2=NCCN2)cc(C(=O)NCc2ccc(Cl)c(Cl)c2)n1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB019656/BDB019656.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB019656/BDB019656.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB019656/BDB019656.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB019656/BDB019656.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB019656/BDB019656.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 5
P61964
E3 ligase component
BindingDB:BDBM468816 Ki <0.1 nM Very high DOI: 10.7270/Q26Q219X 1