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US10807959, Example 89

E3L019659
Internal ID: BDB019659
Activity data available Local docking-ready structure
Dock with P61964
Structure
/e3_file/ligand_db/generated/BDB019659/BDB019659.sdf
Basic Properties
Compound ID
E3L019659
Internal ID
BDB019659
Molecular formula
C25H20Cl2F4N4O
Molecular weight
539.360000
Exact mass
538.095030
XLogP
6.4252
TPSA
66.3800
HBA / HBD
4 / 2
Rotatable bonds
6
Heavy atoms / rings
36 / 4
Activity summary
Ki unknown 1.90000000 nM
1 activity record(s) imported
InChIKey
IRCPLZIDFDRNET-UHFFFAOYSA-N
SMILES
O=C(NCc1ccc(Cl)c(Cl)c1)c1cc(CNC2=NCCC2)cc(-c2ccc(F)cc2C(F)(F)F)n1
Aliases
BDBM468819 (preferred) US10807959, Example 89 (source_name) BDBM468819 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P61964 WDR5;BIG3
WD repeat-containing protein 5
reported_binder bindingdb_reported Yes No low BindingDB:BDBM468819 medium
; target=WD repeat-containing protein 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM468819 Open - 10.7270/Q26Q219X
PubChem CID146370929 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C(NCc1ccc(Cl)c(Cl)c1)c1cc(CNC2=NCCC2)cc(-c2ccc(F)cc2C(F)(F)F)n1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB019659/BDB019659.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB019659/BDB019659.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB019659/BDB019659.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB019659/BDB019659.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB019659/BDB019659.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 5
P61964
E3 ligase component
BindingDB:BDBM468819 Ki 1.9 nM Very high DOI: 10.7270/Q26Q219X 1