< Back to small molecule database

US10807959, Example B111

E3L019779
Internal ID: BDB019779
Activity data available Local docking-ready structure
Dock with P61964
Structure
/e3_file/ligand_db/generated/BDB019779/BDB019779.sdf
Basic Properties
Compound ID
E3L019779
Internal ID
BDB019779
Molecular formula
C24H25ClN6O
Molecular weight
448.958000
Exact mass
448.177837
XLogP
3.3926
TPSA
91.3000
HBA / HBD
6 / 3
Rotatable bonds
6
Heavy atoms / rings
32 / 4
Activity summary
Ki unknown 0.08700000 nM
1 activity record(s) imported
InChIKey
ULPDCSQAHIVFTA-UHFFFAOYSA-N
SMILES
Cc1cc(-c2cc(CNC3=NCCN3)cc(C(=O)NCc3cc(Cl)ccn3)c2)cc(C)n1
Aliases
BDBM468939 (preferred) US10807959, Example B111 (source_name) BDBM468939 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P61964 WDR5;BIG3
WD repeat-containing protein 5
reported_binder bindingdb_reported Yes No low BindingDB:BDBM468939 medium
; target=WD repeat-containing protein 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM468939 Open - 10.7270/Q26Q219X
PubChem CID146370852 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1cc(-c2cc(CNC3=NCCN3)cc(C(=O)NCc3cc(Cl)ccn3)c2)cc(C)n1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB019779/BDB019779.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB019779/BDB019779.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB019779/BDB019779.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB019779/BDB019779.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB019779/BDB019779.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 5
P61964
E3 ligase component
BindingDB:BDBM468939 Ki 0.087 nM Very high DOI: 10.7270/Q26Q219X 1