< Back to small molecule database

US10807959, Example C21

E3L019788
Internal ID: BDB019788
Activity data available Local docking-ready structure
Dock with P61964
Structure
/e3_file/ligand_db/generated/BDB019788/BDB019788.sdf
Basic Properties
Compound ID
E3L019788
Internal ID
BDB019788
Molecular formula
C21H26N4O3
Molecular weight
382.464000
Exact mass
382.200491
XLogP
2.8717
TPSA
84.8400
HBA / HBD
6 / 2
Rotatable bonds
7
Heavy atoms / rings
28 / 3
Activity summary
Ki unknown 33.00000000 nM
1 activity record(s) imported
InChIKey
CYKGGYCIEPLUOT-UHFFFAOYSA-N
SMILES
COc1cc(OC)cc(C(C)NC(=O)c2cc(CNC3=NCCC3)ccn2)c1
Aliases
BDBM468948 (preferred) US10807959, Example C21 (source_name) BDBM468948 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P61964 WDR5;BIG3
WD repeat-containing protein 5
reported_binder bindingdb_reported Yes No low BindingDB:BDBM468948 medium
; target=WD repeat-containing protein 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM468948 Open - 10.7270/Q26Q219X
PubChem CID146370839 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COc1cc(OC)cc(C(C)NC(=O)c2cc(CNC3=NCCC3)ccn2)c1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB019788/BDB019788.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB019788/BDB019788.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB019788/BDB019788.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB019788/BDB019788.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB019788/BDB019788.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 5
P61964
E3 ligase component
BindingDB:BDBM468948 Ki 33 nM High DOI: 10.7270/Q26Q219X 1