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US10844044, Example 104

E3L019872
Internal ID: BDB019872
Activity data available Local docking-ready structure
Dock with P61964
Structure
/e3_file/ligand_db/generated/BDB019872/BDB019872.sdf
Basic Properties
Compound ID
E3L019872
Internal ID
BDB019872
Molecular formula
C27H21Cl2F4N5O3
Molecular weight
610.395000
Exact mass
609.095758
XLogP
5.8269
TPSA
113.0000
HBA / HBD
4 / 3
Rotatable bonds
8
Heavy atoms / rings
41 / 4
Activity summary
Ki unknown 0.13000000 nM
1 activity record(s) imported
InChIKey
UZNDCISOOMRVTD-UHFFFAOYSA-N
SMILES
Cn1ccn(Cc2cc(C(=O)NC(CC(=O)O)c3ccc(Cl)c(Cl)c3)nc(-c3ccc(F)cc3C(F)(F)F)c2)c1=N
Aliases
BDBM473240 (preferred) US10844044, Example 104 (source_name) BDBM473240 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P61964 WDR5;BIG3
WD repeat-containing protein 5
reported_binder bindingdb_reported Yes No low BindingDB:BDBM473240 medium
; target=WD repeat-containing protein 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM473240 Open - 10.7270/Q21R6TKB
PubChem CID146456027 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cn1ccn(Cc2cc(C(=O)NC(CC(=O)O)c3ccc(Cl)c(Cl)c3)nc(-c3ccc(F)cc3C(F)(F)F)c2)c1=N keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB019872/BDB019872.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB019872/BDB019872.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB019872/BDB019872.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB019872/BDB019872.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB019872/BDB019872.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 5
P61964
E3 ligase component
BindingDB:BDBM473240 Ki 0.13 nM Very high DOI: 10.7270/Q21R6TKB 1