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US10844044, Example 106

E3L019880
Internal ID: BDB019880
Activity data available Local docking-ready structure
Dock with P61964
Structure
/e3_file/ligand_db/generated/BDB019880/BDB019880.sdf
Basic Properties
Compound ID
E3L019880
Internal ID
BDB019880
Molecular formula
C28H23Cl2F4N5O3
Molecular weight
624.422000
Exact mass
623.111408
XLogP
5.9153
TPSA
102.0000
HBA / HBD
5 / 2
Rotatable bonds
8
Heavy atoms / rings
42 / 4
Activity summary
Ki unknown 0.34000000 nM
1 activity record(s) imported
InChIKey
HFVBGMFXLNTJIC-UHFFFAOYSA-N
SMILES
COC(=O)CC(NC(=O)c1cc(Cn2ccn(C)c2=N)cc(-c2ccc(F)cc2C(F)(F)F)n1)c1ccc(Cl)c(Cl)c1
Aliases
BDBM473248 (preferred) US10844044, Example 106 (source_name) BDBM473248 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P61964 WDR5;BIG3
WD repeat-containing protein 5
reported_binder bindingdb_reported Yes No low BindingDB:BDBM473248 medium
; target=WD repeat-containing protein 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM473248 Open - 10.7270/Q21R6TKB
PubChem CID146457559 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COC(=O)CC(NC(=O)c1cc(Cn2ccn(C)c2=N)cc(-c2ccc(F)cc2C(F)(F)F)n1)c1ccc(Cl)c(Cl)c1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB019880/BDB019880.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB019880/BDB019880.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB019880/BDB019880.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB019880/BDB019880.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB019880/BDB019880.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 5
P61964
E3 ligase component
BindingDB:BDBM473248 Ki 0.34 nM Very high DOI: 10.7270/Q21R6TKB 1