< Back to small molecule database

US10844044, Example 206

E3L019917
Internal ID: BDB019917
Activity data available Local docking-ready structure
Dock with P61964
Structure
/e3_file/ligand_db/generated/BDB019917/BDB019917.sdf
Basic Properties
Compound ID
E3L019917
Internal ID
BDB019917
Molecular formula
C27H32FN5O
Molecular weight
461.585000
Exact mass
461.259089
XLogP
4.2832
TPSA
66.0500
HBA / HBD
3 / 2
Rotatable bonds
7
Heavy atoms / rings
34 / 5
Activity summary
Ki unknown 0.34000000 nM
1 activity record(s) imported
InChIKey
FCJHBKYAOAOAFF-VWLOTQADSA-N
SMILES
Cc1cc([C@@H](NC(=O)c2cc(Cn3ccn(C)c3=N)cc(N3CCCC3)c2)C2CC2)ccc1F
Aliases
BDBM473286 (preferred) US10844044, Example 206 (source_name) BDBM473286 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P61964 WDR5;BIG3
WD repeat-containing protein 5
reported_binder bindingdb_reported Yes No low BindingDB:BDBM473286 medium
; target=WD repeat-containing protein 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM473286 Open - 10.7270/Q21R6TKB
PubChem CID146456407 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1cc([C@@H](NC(=O)c2cc(Cn3ccn(C)c3=N)cc(N3CCCC3)c2)C2CC2)ccc1F keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB019917/BDB019917.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB019917/BDB019917.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB019917/BDB019917.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB019917/BDB019917.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB019917/BDB019917.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 5
P61964
E3 ligase component
BindingDB:BDBM473286 Ki 0.34 nM Very high DOI: 10.7270/Q21R6TKB 1