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BDBM473309

E3L019940
Internal ID: BDB019940
Activity data available Local docking-ready structure
Dock with P61964
Structure
/e3_file/ligand_db/generated/BDB019940/BDB019940.sdf
Basic Properties
Compound ID
E3L019940
Internal ID
BDB019940
Molecular formula
C27H24Cl2FN5O2
Molecular weight
540.426000
Exact mass
539.129109
XLogP
5.0684
TPSA
81.2800
HBA / HBD
3 / 1
Rotatable bonds
6
Heavy atoms / rings
37 / 4
Activity summary
Ki > 33.00000000 nM
1 activity record(s) imported
InChIKey
PIGJSXMSIDVRBW-MUGXBBEHSA-N
SMILES
CC(=O)/N=c1\n(C)ccn1Cc1cc(C(=O)NCc2ccc(Cl)c(Cl)c2)cc(-c2ccc(F)nc2C)c1
Aliases
BDBM473309 (preferred) BDBM473309 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P61964 WDR5;BIG3
WD repeat-containing protein 5
reported_binder bindingdb_reported Yes No low BindingDB:BDBM473309 medium
; target=WD repeat-containing protein 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM473309 Open - 10.7270/Q21R6TKB
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC(=O)/N=c1\n(C)ccn1Cc1cc(C(=O)NCc2ccc(Cl)c(Cl)c2)cc(-c2ccc(F)nc2C)c1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB019940/BDB019940.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB019940/BDB019940.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB019940/BDB019940.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB019940/BDB019940.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB019940/BDB019940.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 5
P61964
E3 ligase component
BindingDB:BDBM473309 Ki >33 nM Uncertain DOI: 10.7270/Q21R6TKB 1