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US10844044, Example 307

E3L019953
Internal ID: BDB019953
Activity data available Local docking-ready structure
Dock with P61964
Structure
/e3_file/ligand_db/generated/BDB019953/BDB019953.sdf
Basic Properties
Compound ID
E3L019953
Internal ID
BDB019953
Molecular formula
C27H26FN3O3S
Molecular weight
491.588000
Exact mass
491.167891
XLogP
5.1391
TPSA
76.3400
HBA / HBD
5 / 2
Rotatable bonds
8
Heavy atoms / rings
35 / 4
Activity summary
Ki unknown 0.95000000 nM
1 activity record(s) imported
InChIKey
CDTWRLDBXMPKLF-UHFFFAOYSA-N
SMILES
COc1cc(CNC(=O)c2cc(Cn3ccsc3=N)cc(-c3ccc(F)cc3C)c2)cc(OC)c1
Aliases
BDBM473323 (preferred) US10844044, Example 307 (source_name) BDBM473323 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P61964 WDR5;BIG3
WD repeat-containing protein 5
reported_binder bindingdb_reported Yes No low BindingDB:BDBM473323 medium
; target=WD repeat-containing protein 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM473323 Open - 10.7270/Q21R6TKB
PubChem CID146456635 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COc1cc(CNC(=O)c2cc(Cn3ccsc3=N)cc(-c3ccc(F)cc3C)c2)cc(OC)c1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB019953/BDB019953.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB019953/BDB019953.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB019953/BDB019953.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB019953/BDB019953.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB019953/BDB019953.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 5
P61964
E3 ligase component
BindingDB:BDBM473323 Ki 0.95 nM Very high DOI: 10.7270/Q21R6TKB 1