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US10844044, Example 129

E3L019970
Internal ID: BDB019970
Activity data available Local docking-ready structure
Dock with P61964
Structure
/e3_file/ligand_db/generated/BDB019970/BDB019970.sdf
Basic Properties
Compound ID
E3L019970
Internal ID
BDB019970
Molecular formula
C27H25F4N5
Molecular weight
495.524000
Exact mass
495.204609
XLogP
5.3514
TPSA
58.6300
HBA / HBD
3 / 2
Rotatable bonds
6
Heavy atoms / rings
36 / 5
Activity summary
Ki > 33.00000000 nM
1 activity record(s) imported
InChIKey
DVNIUENBLAEGCP-DEOSSOPVSA-N
SMILES
Cn1ccn(Cc2cc(CN[C@H]3CCc4cc(F)ccc43)cc(-c3cccnc3C(F)(F)F)c2)c1=N
Aliases
BDBM473341 (preferred) US10844044, Example 129 (source_name) BDBM473341 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P61964 WDR5;BIG3
WD repeat-containing protein 5
reported_binder bindingdb_reported Yes No low BindingDB:BDBM473341 medium
; target=WD repeat-containing protein 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM473341 Open - 10.7270/Q21R6TKB
PubChem CID146487901 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cn1ccn(Cc2cc(CN[C@H]3CCc4cc(F)ccc43)cc(-c3cccnc3C(F)(F)F)c2)c1=N keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB019970/BDB019970.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB019970/BDB019970.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB019970/BDB019970.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB019970/BDB019970.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB019970/BDB019970.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 5
P61964
E3 ligase component
BindingDB:BDBM473341 Ki >33 nM Uncertain DOI: 10.7270/Q21R6TKB 1