< Back to small molecule database

US10844044, Example 237

E3L020038
Internal ID: BDB020038
Activity data available Local docking-ready structure
Dock with P61964
Structure
/e3_file/ligand_db/generated/BDB020038/BDB020038.sdf
Basic Properties
Compound ID
E3L020038
Internal ID
BDB020038
Molecular formula
C27H24F3N5O2
Molecular weight
507.516000
Exact mass
507.188210
XLogP
5.2742
TPSA
96.8000
HBA / HBD
5 / 2
Rotatable bonds
7
Heavy atoms / rings
37 / 5
Activity summary
Ki unknown 7.50000000 nM
1 activity record(s) imported
InChIKey
HMJYCTGVPOBEJW-UHFFFAOYSA-N
SMILES
Cc1ccnc(C(NC(=O)c2cc(Cn3ccoc3=N)cc(-c3ncccc3C(F)(F)F)c2)C2CC2)c1
Aliases
BDBM473413 (preferred) US10844044, Example 237 (source_name) BDBM473413 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P61964 WDR5;BIG3
WD repeat-containing protein 5
reported_binder bindingdb_reported Yes No low BindingDB:BDBM473413 medium
; target=WD repeat-containing protein 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM473413 Open - 10.7270/Q21R6TKB
PubChem CID146455713 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1ccnc(C(NC(=O)c2cc(Cn3ccoc3=N)cc(-c3ncccc3C(F)(F)F)c2)C2CC2)c1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB020038/BDB020038.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB020038/BDB020038.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB020038/BDB020038.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB020038/BDB020038.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB020038/BDB020038.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 5
P61964
E3 ligase component
BindingDB:BDBM473413 Ki 7.5 nM Very high DOI: 10.7270/Q21R6TKB 1