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US10844044, Example 332

E3L020047
Internal ID: BDB020047
Activity data available Local docking-ready structure
Dock with P61964
Structure
/e3_file/ligand_db/generated/BDB020047/BDB020047.sdf
Basic Properties
Compound ID
E3L020047
Internal ID
BDB020047
Molecular formula
C27H26Cl2FN3O
Molecular weight
498.429000
Exact mass
497.143696
XLogP
6.9194
TPSA
56.1900
HBA / HBD
2 / 2
Rotatable bonds
6
Heavy atoms / rings
34 / 4
Activity summary
Ki unknown 19.00000000 nM
1 activity record(s) imported
InChIKey
MZGTVDSJTZRYAM-UHFFFAOYSA-N
SMILES
Cc1cc(-c2cc(CN3CCCC3=N)cc(C(=O)NCc3ccc(Cl)c(Cl)c3)c2)c(C)cc1F
Aliases
BDBM473423 (preferred) US10844044, Example 332 (source_name) BDBM473423 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P61964 WDR5;BIG3
WD repeat-containing protein 5
reported_binder bindingdb_reported Yes No low BindingDB:BDBM473423 medium
; target=WD repeat-containing protein 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM473423 Open - 10.7270/Q21R6TKB
PubChem CID146455891 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1cc(-c2cc(CN3CCCC3=N)cc(C(=O)NCc3ccc(Cl)c(Cl)c3)c2)c(C)cc1F keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB020047/BDB020047.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB020047/BDB020047.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB020047/BDB020047.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB020047/BDB020047.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB020047/BDB020047.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 5
P61964
E3 ligase component
BindingDB:BDBM473423 Ki 19 nM High DOI: 10.7270/Q21R6TKB 1