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US10844044, Example 152

E3L020061
Internal ID: BDB020061
Activity data available Local docking-ready structure
Dock with P61964
Structure
/e3_file/ligand_db/generated/BDB020061/BDB020061.sdf
Basic Properties
Compound ID
E3L020061
Internal ID
BDB020061
Molecular formula
C28H30FN5O4
Molecular weight
519.577000
Exact mass
519.228183
XLogP
3.2210
TPSA
120.9800
HBA / HBD
5 / 3
Rotatable bonds
9
Heavy atoms / rings
38 / 4
Activity summary
Ki unknown 8.90000000 nM
1 activity record(s) imported
InChIKey
BPAWGPCRDIVHJR-UHFFFAOYSA-N
SMILES
COc1cc(CNC(=O)c2cc(CN3CCN(C)C3=N)cc(-c3ccc(F)cc3C(N)=O)c2)cc(OC)c1
Aliases
BDBM473437 (preferred) US10844044, Example 152 (source_name) BDBM473437 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P61964 WDR5;BIG3
WD repeat-containing protein 5
reported_binder bindingdb_reported Yes No low BindingDB:BDBM473437 medium
; target=WD repeat-containing protein 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM473437 Open - 10.7270/Q21R6TKB
PubChem CID146488137 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COc1cc(CNC(=O)c2cc(CN3CCN(C)C3=N)cc(-c3ccc(F)cc3C(N)=O)c2)cc(OC)c1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB020061/BDB020061.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB020061/BDB020061.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB020061/BDB020061.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB020061/BDB020061.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB020061/BDB020061.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 5
P61964
E3 ligase component
BindingDB:BDBM473437 Ki 8.9 nM Very high DOI: 10.7270/Q21R6TKB 1