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US10844044, Example 251

E3L020093
Internal ID: BDB020093
Activity data available Local docking-ready structure
Dock with P61964
Structure
/e3_file/ligand_db/generated/BDB020093/BDB020093.sdf
Basic Properties
Compound ID
E3L020093
Internal ID
BDB020093
Molecular formula
C30H28F4N4O2
Molecular weight
552.572000
Exact mass
552.214839
XLogP
6.5807
TPSA
83.9100
HBA / HBD
4 / 2
Rotatable bonds
8
Heavy atoms / rings
40 / 5
Activity summary
Ki unknown 1.24000000 nM
1 activity record(s) imported
InChIKey
NKRZATRXQOEPTO-SANMLTNESA-N
SMILES
CCc1cn(Cc2cc(C(=O)N[C@H](c3ccc(F)c(C)c3)C3CC3)cc(-c3cccnc3C(F)(F)F)c2)c(=N)o1
Aliases
BDBM473470 (preferred) US10844044, Example 251 (source_name) BDBM473470 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P61964 WDR5;BIG3
WD repeat-containing protein 5
reported_binder bindingdb_reported Yes No low BindingDB:BDBM473470 medium
; target=WD repeat-containing protein 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM473470 Open - 10.7270/Q21R6TKB
PubChem CID146456272 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCc1cn(Cc2cc(C(=O)N[C@H](c3ccc(F)c(C)c3)C3CC3)cc(-c3cccnc3C(F)(F)F)c2)c(=N)o1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB020093/BDB020093.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB020093/BDB020093.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB020093/BDB020093.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB020093/BDB020093.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB020093/BDB020093.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 5
P61964
E3 ligase component
BindingDB:BDBM473470 Ki 1.24 nM Very high DOI: 10.7270/Q21R6TKB 1