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US10844044, Example 74

E3L020111
Internal ID: BDB020111
Activity data available Local docking-ready structure
Dock with P61964
Structure
/e3_file/ligand_db/generated/BDB020111/BDB020111.sdf
Basic Properties
Compound ID
E3L020111
Internal ID
BDB020111
Molecular formula
C30H29F4N5O3
Molecular weight
583.586000
Exact mass
583.220653
XLogP
5.4726
TPSA
94.1600
HBA / HBD
5 / 2
Rotatable bonds
9
Heavy atoms / rings
42 / 5
Activity summary
Ki unknown 0.64000000 nM
1 activity record(s) imported
InChIKey
KBQZVFHNXFUGGQ-UHFFFAOYSA-N
SMILES
COc1cc(OC)cc(C(NC(=O)c2cc(Cn3ccn(C)c3=N)cc(-c3ncc(F)cc3C(F)(F)F)c2)C2CC2)c1
Aliases
BDBM473488 (preferred) US10844044, Example 74 (source_name) BDBM473488 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P61964 WDR5;BIG3
WD repeat-containing protein 5
reported_binder bindingdb_reported Yes No low BindingDB:BDBM473488 medium
; target=WD repeat-containing protein 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM473488 Open - 10.7270/Q21R6TKB
PubChem CID146456022 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COc1cc(OC)cc(C(NC(=O)c2cc(Cn3ccn(C)c3=N)cc(-c3ncc(F)cc3C(F)(F)F)c2)C2CC2)c1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB020111/BDB020111.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB020111/BDB020111.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB020111/BDB020111.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB020111/BDB020111.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB020111/BDB020111.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 5
P61964
E3 ligase component
BindingDB:BDBM473488 Ki 0.64 nM Very high DOI: 10.7270/Q21R6TKB 1