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US10844044, Example 257

E3L020117
Internal ID: BDB020117
Activity data available Local docking-ready structure
Dock with P61964
Structure
/e3_file/ligand_db/generated/BDB020117/BDB020117.sdf
Basic Properties
Compound ID
E3L020117
Internal ID
BDB020117
Molecular formula
C25H19ClF4N4O2
Molecular weight
518.898000
Exact mass
518.113266
XLogP
5.9732
TPSA
83.9100
HBA / HBD
4 / 2
Rotatable bonds
6
Heavy atoms / rings
36 / 4
Activity summary
Ki unknown 2.00000000 nM
1 activity record(s) imported
InChIKey
FRNNWCWURRPFGG-AWEZNQCLSA-N
SMILES
C[C@H](NC(=O)c1cc(Cn2ccoc2=N)cc(-c2cccnc2C(F)(F)F)c1)c1ccc(F)c(Cl)c1
Aliases
BDBM473494 (preferred) US10844044, Example 257 (source_name) BDBM473494 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P61964 WDR5;BIG3
WD repeat-containing protein 5
reported_binder bindingdb_reported Yes No low BindingDB:BDBM473494 medium
; target=WD repeat-containing protein 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM473494 Open - 10.7270/Q21R6TKB
PubChem CID146457132 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready C[C@H](NC(=O)c1cc(Cn2ccoc2=N)cc(-c2cccnc2C(F)(F)F)c1)c1ccc(F)c(Cl)c1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB020117/BDB020117.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB020117/BDB020117.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB020117/BDB020117.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB020117/BDB020117.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB020117/BDB020117.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 5
P61964
E3 ligase component
BindingDB:BDBM473494 Ki 2 nM Very high DOI: 10.7270/Q21R6TKB 1