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US10844044, Example 76

E3L020119
Internal ID: BDB020119
Activity data available Local docking-ready structure
Dock with P61964
Structure
/e3_file/ligand_db/generated/BDB020119/BDB020119.sdf
Basic Properties
Compound ID
E3L020119
Internal ID
BDB020119
Molecular formula
C26H23ClF3N5O
Molecular weight
513.951000
Exact mass
513.154323
XLogP
5.3270
TPSA
75.7000
HBA / HBD
3 / 2
Rotatable bonds
6
Heavy atoms / rings
36 / 4
Activity summary
Ki < 0.10000000 nM
1 activity record(s) imported
InChIKey
YDHPEKHYIWUSFK-UHFFFAOYSA-N
SMILES
Cc1cc(CNC(=O)c2cc(Cn3ccn(C)c3=N)cc(-c3cccnc3C(F)(F)F)c2)ccc1Cl
Aliases
BDBM473496 (preferred) US10844044, Example 76 (source_name) BDBM473496 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P61964 WDR5;BIG3
WD repeat-containing protein 5
reported_binder bindingdb_reported Yes No low BindingDB:BDBM473496 medium
; target=WD repeat-containing protein 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM473496 Open - 10.7270/Q21R6TKB
PubChem CID146455792 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1cc(CNC(=O)c2cc(Cn3ccn(C)c3=N)cc(-c3cccnc3C(F)(F)F)c2)ccc1Cl keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB020119/BDB020119.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB020119/BDB020119.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB020119/BDB020119.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB020119/BDB020119.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB020119/BDB020119.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 5
P61964
E3 ligase component
BindingDB:BDBM473496 Ki <0.1 nM Very high DOI: 10.7270/Q21R6TKB 1