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US10875851, Example 74

E3L020309
Internal ID: BDB020309
Activity data available Local docking-ready structure
Dock with P00748
Structure
/e3_file/ligand_db/generated/BDB020309/BDB020309.sdf
Basic Properties
Compound ID
E3L020309
Internal ID
BDB020309
Molecular formula
C48H62ClN7O7S
Molecular weight
916.586000
Exact mass
915.411996
XLogP
5.8011
TPSA
175.6400
HBA / HBD
10 / 4
Rotatable bonds
17
Heavy atoms / rings
64 / 7
Activity summary
IC50 unknown 3.70000000 nM
1 activity record(s) imported
InChIKey
KBWBSTVPIPXISE-HRYFAEDISA-N
SMILES
COc1cc(CNC(=O)[C@@H]2CN(C(=O)Oc3ccc4ccccc4c3Cl)CCN2C(=O)[C@@H](CCCCNS(C)(=O)=O)NC2CCC3(CC2)CCN(Cc2ccccc2)C3)ccc1CN
Aliases
BDBM476418 (preferred) US10875851, Example 74 (source_name) BDBM476418 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00748 F12
Coagulation factor XII
reported_binder bindingdb_reported Yes No low BindingDB:BDBM476418 medium
; target=Coagulation factor XII
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM476418 Open - 10.7270/Q2JD50W8
PubChem CID146263680 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COc1cc(CNC(=O)[C@@H]2CN(C(=O)Oc3ccc4ccccc4c3Cl)CCN2C(=O)[C@@H](CCCCNS(C)(=O)=O)NC2CCC3(CC2)CCN(Cc2ccccc2)C3)ccc1CN keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB020309/BDB020309.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB020309/BDB020309.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB020309/BDB020309.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB020309/BDB020309.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB020309/BDB020309.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Coagulation factor XII
P00748
E3 ligase component
BindingDB:BDBM476418 IC50 3.7 nM Very high DOI: 10.7270/Q2JD50W8 1