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US10875851, Example 75

E3L020310
Internal ID: BDB020310
Activity data available Local docking-ready structure
Dock with P00748
Structure
/e3_file/ligand_db/generated/BDB020310/BDB020310.sdf
Basic Properties
Compound ID
E3L020310
Internal ID
BDB020310
Molecular formula
C42H59N7O7S2
Molecular weight
838.110000
Exact mass
837.391739
XLogP
4.1924
TPSA
175.6400
HBA / HBD
11 / 4
Rotatable bonds
17
Heavy atoms / rings
58 / 6
Activity summary
IC50 unknown 5.70000000 nM
1 activity record(s) imported
InChIKey
IUHZOGMZOJBFPS-PHYQGNOOSA-N
SMILES
COC(N)c1cccc(OC(=O)N2CCN(C(=O)[C@@H](CCCCNS(C)(=O)=O)NC3CCC4(CC3)CCN(Cc3ccccc3)C4)[C@H](C(=O)NCc3cccs3)C2)c1
Aliases
BDBM476419 (preferred) US10875851, Example 75 (source_name) BDBM476419 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00748 F12
Coagulation factor XII
reported_binder bindingdb_reported Yes No low BindingDB:BDBM476419 medium
; target=Coagulation factor XII
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM476419 Open - 10.7270/Q2JD50W8
PubChem CID146257356 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COC(N)c1cccc(OC(=O)N2CCN(C(=O)[C@@H](CCCCNS(C)(=O)=O)NC3CCC4(CC3)CCN(Cc3ccccc3)C4)[C@H](C(=O)NCc3cccs3)C2)c1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB020310/BDB020310.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB020310/BDB020310.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB020310/BDB020310.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB020310/BDB020310.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB020310/BDB020310.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Coagulation factor XII
P00748
E3 ligase component
BindingDB:BDBM476419 IC50 5.7 nM Very high DOI: 10.7270/Q2JD50W8 1