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US10875851, Example 93

E3L020328
Internal ID: BDB020328
Activity data available Local docking-ready structure
Dock with P00748
Structure
/e3_file/ligand_db/generated/BDB020328/BDB020328.sdf
Basic Properties
Compound ID
E3L020328
Internal ID
BDB020328
Molecular formula
C41H62N6O3S
Molecular weight
719.053000
Exact mass
718.460411
XLogP
5.5090
TPSA
88.2300
HBA / HBD
7 / 2
Rotatable bonds
15
Heavy atoms / rings
51 / 6
Activity summary
IC50 unknown 24.00000000 nM
1 activity record(s) imported
InChIKey
PZJSOPBELHUEHX-RHOOGNOTSA-N
SMILES
CN(C)CCCC[C@@H](NC1CCC2(CC1)CCN(Cc1ccccc1)C2)C(=O)N1CCN(C(=O)CC2CCCC2)C[C@H]1C(=O)NCc1cccs1
Aliases
BDBM476437 (preferred) US10875851, Example 93 (source_name) BDBM476437 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00748 F12
Coagulation factor XII		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM476437 medium
; target=Coagulation factor XII
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM476437 Open - 10.7270/Q2JD50W8
PubChem CID146257537 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN(C)CCCC[C@@H](NC1CCC2(CC1)CCN(Cc1ccccc1)C2)C(=O)N1CCN(C(=O)CC2CCCC2)C[C@H]1C(=O)NCc1cccs1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB020328/BDB020328.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB020328/BDB020328.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB020328/BDB020328.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB020328/BDB020328.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB020328/BDB020328.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Coagulation factor XII
P00748
E3 ligase component 		BindingDB:BDBM476437 IC50 24 nM High DOI: 10.7270/Q2JD50W8 1