< Back to small molecule database

US10875851, Example 122

E3L020356
Internal ID: BDB020356
Activity data available Local docking-ready structure
Dock with P00748
Structure
/e3_file/ligand_db/generated/BDB020356/BDB020356.sdf
Basic Properties
Compound ID
E3L020356
Internal ID
BDB020356
Molecular formula
C33H48N6O5S2
Molecular weight
672.918000
Exact mass
672.312761
XLogP
3.4035
TPSA
132.4400
HBA / HBD
9 / 3
Rotatable bonds
13
Heavy atoms / rings
46 / 5
Activity summary
IC50 unknown 14.00000000 nM
2 activity record(s) imported
InChIKey
RMSRFWDFAHAENX-UDKDNODWSA-N
SMILES
C[C@H]1N=C(N2CCN(C(=O)[C@@H](CCCCNS(C)(=O)=O)NC3CCCCC3)[C@H](C(=O)NCc3cccs3)C2)O[C@H]1c1ccccc1
Aliases
BDBM476466 (preferred) US10875851, Example 122 (source_name) BDBM476466 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00748 F12
Coagulation factor XII		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM476466 medium
; target=Coagulation factor XII
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM476466 Open - 10.7270/Q2JD50W8
PubChem CID146257602 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready C[C@H]1N=C(N2CCN(C(=O)[C@@H](CCCCNS(C)(=O)=O)NC3CCCCC3)[C@H](C(=O)NCc3cccs3)C2)O[C@H]1c1ccccc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB020356/BDB020356.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB020356/BDB020356.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB020356/BDB020356.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB020356/BDB020356.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB020356/BDB020356.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Coagulation factor XII
P00748
E3 ligase component 		BindingDB:BDBM476466 IC50 14 nM High DOI: 10.7270/Q2JD50W8 2 source records