< Back to small molecule database

US10875851, Example 130

E3L020364
Internal ID: BDB020364
Activity data available Local docking-ready structure
Dock with P00748
Structure
/e3_file/ligand_db/generated/BDB020364/BDB020364.sdf
Basic Properties
Compound ID
E3L020364
Internal ID
BDB020364
Molecular formula
C45H63N7O3S
Molecular weight
782.112000
Exact mass
781.471310
XLogP
6.2603
TPSA
83.9600
HBA / HBD
9 / 1
Rotatable bonds
14
Heavy atoms / rings
56 / 7
Activity summary
IC50 unknown 1.20000000 nM
2 activity record(s) imported
InChIKey
DAUXTYXLWJPADT-FCMREHKESA-N
SMILES
C[C@@H]1N=C(N2CCN(C(=O)[C@@H](CCCCN(C)C)N(C)C3CCC4(CC3)CCN(Cc3ccccc3)C4)[C@H](C(=O)NCc3cccs3)C2)O[C@H]1c1ccccc1
Aliases
BDBM476474 (preferred) US10875851, Example 130 (source_name) BDBM476474 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00748 F12
Coagulation factor XII
reported_binder bindingdb_reported Yes No low BindingDB:BDBM476474 medium
; target=Coagulation factor XII
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM476474 Open - 10.7270/Q2JD50W8
PubChem CID146257580 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready C[C@@H]1N=C(N2CCN(C(=O)[C@@H](CCCCN(C)C)N(C)C3CCC4(CC3)CCN(Cc3ccccc3)C4)[C@H](C(=O)NCc3cccs3)C2)O[C@H]1c1ccccc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB020364/BDB020364.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB020364/BDB020364.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB020364/BDB020364.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB020364/BDB020364.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB020364/BDB020364.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Coagulation factor XII
P00748
E3 ligase component
BindingDB:BDBM476474 IC50 1.2 nM Very high DOI: 10.7270/Q2JD50W8 1
Coagulation factor XII
P00748
E3 ligase component
BindingDB:BDBM476474 IC50 1.8 nM Very high DOI: 10.7270/Q2JD50W8 1