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US10875851, Example 141

E3L020373
Internal ID: BDB020373
Activity data available Local docking-ready structure
Dock with P00748
Structure
/e3_file/ligand_db/generated/BDB020373/BDB020373.sdf
Basic Properties
Compound ID
E3L020373
Internal ID
BDB020373
Molecular formula
C39H59N7O3S
Molecular weight
706.014000
Exact mass
705.440010
XLogP
4.5669
TPSA
92.7500
HBA / HBD
9 / 2
Rotatable bonds
13
Heavy atoms / rings
50 / 6
Activity summary
IC50 unknown 9.20000000 nM
1 activity record(s) imported
InChIKey
LKCOGCAGIMSLQK-SCVMGEOMSA-N
SMILES
CN(C)CCCC[C@@H](NC1CCC2(CC1)CCN(Cc1ccccc1)C2)C(=O)N1CCN(C2=NC(C)(C)CO2)C[C@H]1C(=O)NCc1cccs1
Aliases
BDBM476485 (preferred) US10875851, Example 141 (source_name) BDBM476485 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00748 F12
Coagulation factor XII		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM476485 medium
; target=Coagulation factor XII
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM476485 Open - 10.7270/Q2JD50W8
PubChem CID146257524 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN(C)CCCC[C@@H](NC1CCC2(CC1)CCN(Cc1ccccc1)C2)C(=O)N1CCN(C2=NC(C)(C)CO2)C[C@H]1C(=O)NCc1cccs1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB020373/BDB020373.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB020373/BDB020373.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB020373/BDB020373.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB020373/BDB020373.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB020373/BDB020373.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Coagulation factor XII
P00748
E3 ligase component 		BindingDB:BDBM476485 IC50 9.2 nM Very high DOI: 10.7270/Q2JD50W8 1