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US10875851, Example 155

E3L020385
Internal ID: BDB020385
Activity data available Local docking-ready structure
Dock with P00748
Structure
/e3_file/ligand_db/generated/BDB020385/BDB020385.sdf
Basic Properties
Compound ID
E3L020385
Internal ID
BDB020385
Molecular formula
C34H49N7O4
Molecular weight
619.811000
Exact mass
619.384603
XLogP
2.4827
TPSA
123.8100
HBA / HBD
8 / 2
Rotatable bonds
12
Heavy atoms / rings
45 / 4
Activity summary
IC50 unknown 54.00000000 nM
1 activity record(s) imported
InChIKey
PDPOKPHRLHZAEA-PEIRWHMSSA-N
SMILES
CN(C)CCCC[C@H](C(=O)N1CCN(C2=NC(C)(C)C(c3ccccc3)O2)C[C@H]1C(=O)NCc1ccc(C(N)=O)cc1)N(C)C
Aliases
BDBM476499 (preferred) US10875851, Example 155 (source_name) BDBM476499 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00748 F12
Coagulation factor XII		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM476499 medium
; target=Coagulation factor XII
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM476499 Open - 10.7270/Q2JD50W8
PubChem CID146257432 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN(C)CCCC[C@H](C(=O)N1CCN(C2=NC(C)(C)C(c3ccccc3)O2)C[C@H]1C(=O)NCc1ccc(C(N)=O)cc1)N(C)C keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB020385/BDB020385.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB020385/BDB020385.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB020385/BDB020385.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB020385/BDB020385.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB020385/BDB020385.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Coagulation factor XII
P00748
E3 ligase component 		BindingDB:BDBM476499 IC50 54 nM High DOI: 10.7270/Q2JD50W8 1