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US10875851, Example 177

E3L020407
Internal ID: BDB020407
Activity data available Local docking-ready structure
Dock with P00748
Structure
/e3_file/ligand_db/generated/BDB020407/BDB020407.sdf
Basic Properties
Compound ID
E3L020407
Internal ID
BDB020407
Molecular formula
C39H58N8O4S
Molecular weight
735.012000
Exact mass
734.430173
XLogP
3.6239
TPSA
158.6200
HBA / HBD
10 / 4
Rotatable bonds
14
Heavy atoms / rings
52 / 6
Activity summary
IC50 unknown 28.00000000 nM
1 activity record(s) imported
InChIKey
RUBFNAJTZIWJLV-MENHFZJGSA-N
SMILES
C[C@@H]1N=C(N2CCN(C(=O)[C@@H](CCCCN3CCCCC3)NC3CCC(CN)CC3)[C@H](C(=O)NCc3ccc(C(N)=O)s3)C2)O[C@H]1c1ccccc1
Aliases
BDBM476521 (preferred) US10875851, Example 177 (source_name) BDBM476521 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00748 F12
Coagulation factor XII		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM476521 medium
; target=Coagulation factor XII
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM476521 Open - 10.7270/Q2JD50W8
PubChem CID146257482 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready C[C@@H]1N=C(N2CCN(C(=O)[C@@H](CCCCN3CCCCC3)NC3CCC(CN)CC3)[C@H](C(=O)NCc3ccc(C(N)=O)s3)C2)O[C@H]1c1ccccc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB020407/BDB020407.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB020407/BDB020407.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB020407/BDB020407.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB020407/BDB020407.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB020407/BDB020407.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Coagulation factor XII
P00748
E3 ligase component 		BindingDB:BDBM476521 IC50 28 nM High DOI: 10.7270/Q2JD50W8 1