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US10981898, Example 24

E3L020776
Internal ID: BDB020776
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB020776/BDB020776.sdf
Basic Properties
Compound ID
E3L020776
Internal ID
BDB020776
Molecular formula
C30H28ClFN2O4
Molecular weight
535.015000
Exact mass
534.172163
XLogP
5.2244
TPSA
93.7900
HBA / HBD
5 / 2
Rotatable bonds
8
Heavy atoms / rings
38 / 5
Activity summary
IC50 unknown 7.50000000 nM
1 activity record(s) imported
InChIKey
DIVMTXBUDOMYFO-UHFFFAOYSA-N
SMILES
CC(C)(O)c1cc(F)c2c(c1)C(=O)N(Cc1ccc(C#N)cc1)C2(OCC1(CO)CC1)c1ccc(Cl)cc1
Aliases
BDBM492930 (preferred) US10981898, Example 24 (source_name) BDBM492930 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2
reported_binder bindingdb_reported Yes No low BindingDB:BDBM492930 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM492930 Open - 10.7270/Q2154M5V
PubChem CID156907817 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC(C)(O)c1cc(F)c2c(c1)C(=O)N(Cc1ccc(C#N)cc1)C2(OCC1(CO)CC1)c1ccc(Cl)cc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB020776/BDB020776.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB020776/BDB020776.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB020776/BDB020776.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB020776/BDB020776.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB020776/BDB020776.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component
BindingDB:BDBM492930 IC50 7.5 nM Very high DOI: 10.7270/Q2154M5V 1