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BDBM498142

E3L020843
Internal ID: BDB020843
Activity data available Local docking-ready structure
Dock with O75530 Dock with Q09028
Structure
/e3_file/ligand_db/generated/BDB020843/BDB020843.sdf
Basic Properties
Compound ID
E3L020843
Internal ID
BDB020843
Molecular formula
C19H21N5O2
Molecular weight
351.410000
Exact mass
351.169525
XLogP
2.5653
TPSA
73.5700
HBA / HBD
6 / 1
Rotatable bonds
4
Heavy atoms / rings
26 / 5
Activity summary
IC50 unknown 84.00000000 nM
2 activity record(s) imported
InChIKey
ZAAPADHDHFHGBM-UHFFFAOYSA-N
SMILES
c1cc(CNc2ncc(C3CCOCC3)c3nncn23)c2c(c1)OCC2
Aliases
BDBM498142 (preferred) N-(2,3-dihydro-1-benzofuran-4-ylmethyl)-8-(oxan-4-yl)-[1,2,4]triazolo[4,3-c]pyrimidin-5-amine (source_name) BDBM498142 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
O75530 EED
Polycomb protein EED		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM498142 medium
; target=Histone-lysine N-methyltransferase EZH2
Q09028 RBBP4;RBAP48
Histone-binding protein RBBP4		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM498142 medium
; target=Histone-lysine N-methyltransferase EZH2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM498142 Open - 10.7270/Q2GX4FP4
PubChem CID138516132 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready c1cc(CNc2ncc(C3CCOCC3)c3nncn23)c2c(c1)OCC2 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB020843/BDB020843.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB020843/BDB020843.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB020843/BDB020843.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB020843/BDB020843.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB020843/BDB020843.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Histone-lysine N-methyltransferase EZH2
O75530
E3 ligase component 		BindingDB:BDBM498142 IC50 84 nM High DOI: 10.7270/Q2GX4FP4 1
Histone-lysine N-methyltransferase EZH2
Q09028
E3 ligase component 		BindingDB:BDBM498142 IC50 84 nM High DOI: 10.7270/Q2GX4FP4 1