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BDBM503605

E3L020959
Internal ID: BDB020959
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB020959/BDB020959.sdf
Basic Properties
Compound ID
E3L020959
Internal ID
BDB020959
Molecular formula
C20H19N7O2
Molecular weight
389.419000
Exact mass
389.160023
XLogP
0.8662
TPSA
118.8700
HBA / HBD
7 / 1
Rotatable bonds
4
Heavy atoms / rings
29 / 4
Activity summary
IC50 unknown 92.00000000 nM
1 activity record(s) imported
InChIKey
SMJAGPVWISRXSA-UHFFFAOYSA-N
SMILES
N#Cc1cnc(N2CCN(C(=O)CCc3nc4ccccc4c(=O)[nH]3)CC2)nc1
Aliases
BDBM503605 (preferred) 2-[4-[3-(4-oxo-3H-quinazolin-2-yl)propanoyl]piperazin-1-yl]pyrimidine-5-carbonitrile (source_name) BDBM503605 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM503605 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM503605 Open - 10.7270/Q2WS8XB9
PubChem CID137289750 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready N#Cc1cnc(N2CCN(C(=O)CCc3nc4ccccc4c(=O)[nH]3)CC2)nc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB020959/BDB020959.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB020959/BDB020959.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB020959/BDB020959.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB020959/BDB020959.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB020959/BDB020959.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM503605 IC50 92 nM High DOI: 10.7270/Q2WS8XB9 1