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US11058688, Example 6

E3L020976
Internal ID: BDB020976
Activity data available Local docking-ready structure
Dock with Q92793
Structure
/e3_file/ligand_db/generated/BDB020976/BDB020976.sdf
Basic Properties
Compound ID
E3L020976
Internal ID
BDB020976
Molecular formula
C24H28N8O2
Molecular weight
460.542000
Exact mass
460.233522
XLogP
2.4962
TPSA
95.0300
HBA / HBD
5 / 1
Rotatable bonds
3
Heavy atoms / rings
34 / 6
Activity summary
IC50 unknown 24.00000000 nM
1 activity record(s) imported
InChIKey
MORJDRPDAGQSOG-UHFFFAOYSA-N
SMILES
CNC(=O)N1CCn2c(C3CCOC3)nc(-c3ccc4c(c3)c(-c3cnn(C)c3)nn4C)c2C1
Aliases
BDBM511305 (preferred) US11058688, Example 6 (source_name) BDBM511305 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q92793 CREBBP;CBP
CREB-binding protein
reported_binder bindingdb_reported Yes No low BindingDB:BDBM511305 medium
; target=CREB-binding protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM511305 Open - 10.7270/Q2CC13VN
PubChem CID139537472 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CNC(=O)N1CCn2c(C3CCOC3)nc(-c3ccc4c(c3)c(-c3cnn(C)c3)nn4C)c2C1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB020976/BDB020976.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB020976/BDB020976.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB020976/BDB020976.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB020976/BDB020976.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB020976/BDB020976.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
CREB-binding protein
Q92793
E3 ligase component
BindingDB:BDBM511305 IC50 24 nM High DOI: 10.7270/Q2CC13VN 1