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US11058688, Example 56

E3L021025
Internal ID: BDB021025
Activity data available Local docking-ready structure
Dock with Q92793
Structure
/e3_file/ligand_db/generated/BDB021025/BDB021025.sdf
Basic Properties
Compound ID
E3L021025
Internal ID
BDB021025
Molecular formula
C26H33N9O
Molecular weight
487.612000
Exact mass
487.280807
XLogP
2.8015
TPSA
89.0400
HBA / HBD
5 / 1
Rotatable bonds
3
Heavy atoms / rings
36 / 6
Activity summary
IC50 unknown 22.00000000 nM
1 activity record(s) imported
InChIKey
ZKZUOKYCNRFGON-UHFFFAOYSA-N
SMILES
CNC(=O)N1CCn2c(C3CCN(C)CC3)nc(-c3ccc4c(c3)c(-c3cnn(C)c3)nn4C)c2C1
Aliases
BDBM511355 (preferred) US11058688, Example 56 (source_name) BDBM511355 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q92793 CREBBP;CBP
CREB-binding protein
reported_binder bindingdb_reported Yes No low BindingDB:BDBM511355 medium
; target=CREB-binding protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM511355 Open - 10.7270/Q2CC13VN
PubChem CID139530528 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CNC(=O)N1CCn2c(C3CCN(C)CC3)nc(-c3ccc4c(c3)c(-c3cnn(C)c3)nn4C)c2C1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB021025/BDB021025.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB021025/BDB021025.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB021025/BDB021025.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB021025/BDB021025.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB021025/BDB021025.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
CREB-binding protein
Q92793
E3 ligase component
BindingDB:BDBM511355 IC50 22 nM High DOI: 10.7270/Q2CC13VN 1