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US11091495, Example 116

E3L021274
Internal ID: BDB021274
Activity data available Local docking-ready structure
Dock with O75530 Dock with Q09028
Structure
/e3_file/ligand_db/generated/BDB021274/BDB021274.sdf
Basic Properties
Compound ID
E3L021274
Internal ID
BDB021274
Molecular formula
C24H19FN6O
Molecular weight
426.455000
Exact mass
426.160437
XLogP
4.2265
TPSA
88.1300
HBA / HBD
6 / 1
Rotatable bonds
5
Heavy atoms / rings
32 / 6
Activity summary
IC50 < 100.00000000 nM
10 activity record(s) imported
InChIKey
KRLSHLVXXMNOQV-UHFFFAOYSA-N
SMILES
N#Cc1cn2c(NCc3c(F)ccc4c3CCO4)ncc(-c3ccc(C4CC4)nc3)c2n1
Aliases
BDBM513755 (preferred) US11091495, Example 116 (source_name) BDBM513755 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
O75530 EED
Polycomb protein EED		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM513755 medium
; target=Histone-lysine N-methyltransferase EZH2; Polycomb protein EED
Q09028 RBBP4;RBAP48
Histone-binding protein RBBP4		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM513755 medium
; target=Histone-lysine N-methyltransferase EZH2; Polycomb protein EED
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM513755 Open - 10.7270/Q2V69NQ4; 10.7270/Q2J969K9; 10.7270/Q2XK8M3P; 10.7270/Q2HQ43R4
PubChem CID155788163 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready N#Cc1cn2c(NCc3c(F)ccc4c3CCO4)ncc(-c3ccc(C4CC4)nc3)c2n1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB021274/BDB021274.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB021274/BDB021274.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB021274/BDB021274.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB021274/BDB021274.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB021274/BDB021274.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Histone-lysine N-methyltransferase EZH2
O75530
E3 ligase component 		BindingDB:BDBM513755 IC50 <100 nM High DOI: 10.7270/Q2XK8M3P 1
Histone-lysine N-methyltransferase EZH2
Q09028
E3 ligase component 		BindingDB:BDBM513755 IC50 <100 nM High DOI: 10.7270/Q2J969K9 2 source records
Histone-lysine N-methyltransferase EZH2
O75530
E3 ligase component 		BindingDB:BDBM513755 IC50 <100 nM High DOI: 10.7270/Q2J969K9 2 source records
Histone-lysine N-methyltransferase EZH2
Q09028
E3 ligase component 		BindingDB:BDBM513755 IC50 <100 nM High DOI: 10.7270/Q2XK8M3P 1
Histone-lysine N-methyltransferase EZH2
Q09028
E3 ligase component 		BindingDB:BDBM513755 IC50 <100 nM High DOI: 10.7270/Q2V69NQ4 1
Histone-lysine N-methyltransferase EZH2
O75530
E3 ligase component 		BindingDB:BDBM513755 IC50 <100 nM High DOI: 10.7270/Q2V69NQ4 1
Polycomb protein EED
O75530
E3 ligase component 		BindingDB:BDBM513755 IC50 <100 nM High DOI: 10.7270/Q2HQ43R4 1
Polycomb protein EED
Q09028
E3 ligase component 		BindingDB:BDBM513755 IC50 <100 nM High DOI: 10.7270/Q2HQ43R4 1