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US11111237, Example 119

E3L021527
Internal ID: BDB021527
Activity data available Local docking-ready structure
Dock with Q9BQA1
Structure
/e3_file/ligand_db/generated/BDB021527/BDB021527.sdf
Basic Properties
Compound ID
E3L021527
Internal ID
BDB021527
Molecular formula
C29H34F3N3O2
Molecular weight
513.604000
Exact mass
513.260312
XLogP
4.7436
TPSA
47.0200
HBA / HBD
4 / 1
Rotatable bonds
5
Heavy atoms / rings
37 / 5
Activity summary
IC50 unknown 550.00000000 nM
1 activity record(s) imported
InChIKey
VXEVEKYMTWUQJJ-WUBHUQEYSA-N
SMILES
CN1CCN(C[C@H](O)CN2CCc3ccccc3C2)C(=O)c2ccc(C3=CCC(C(F)(F)F)CC3)cc21
Aliases
BDBM517977 (preferred) US11111237, Example 119 (source_name) BDBM517977 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q9BQA1 WDR77;MEP50;WD45;HKMT1069;Nbla10071
Methylosome protein WDR77		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM517977 medium
; target=Protein arginine N-methyltransferase 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM517977 Open - 10.7270/Q20K2DP5
PubChem CID156207887 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN1CCN(C[C@H](O)CN2CCc3ccccc3C2)C(=O)c2ccc(C3=CCC(C(F)(F)F)CC3)cc21 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB021527/BDB021527.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB021527/BDB021527.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB021527/BDB021527.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB021527/BDB021527.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB021527/BDB021527.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Protein arginine N-methyltransferase 5
Q9BQA1
E3 ligase component 		BindingDB:BDBM517977 IC50 550 nM Moderate DOI: 10.7270/Q20K2DP5 1