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BDBM518715

E3L021684
Internal ID: BDB021684
Activity data available Local docking-ready structure
Dock with Q96GG9
Structure
/e3_file/ligand_db/generated/BDB021684/BDB021684.sdf
Basic Properties
Compound ID
E3L021684
Internal ID
BDB021684
Molecular formula
C27H34ClF3N4O2
Molecular weight
539.042000
Exact mass
538.232239
XLogP
6.5698
TPSA
64.6800
HBA / HBD
3 / 2
Rotatable bonds
9
Heavy atoms / rings
37 / 3
Activity summary
IC50 unknown 95.00000000 nM
1 activity record(s) imported
InChIKey
WFYZKBRFXJYIIF-UHFFFAOYSA-N
SMILES
CCCC(C)N1CCC(N(Cc2cccc(NC(=O)CCl)c2)C(=O)Nc2cccc(C(F)(F)F)c2)CC1
Aliases
BDBM518715 (preferred) 2-chloro-N-(3-((1-(1-(pentan-2-yl)piperidin-4-yl)-3-(3-(trifluoromethyl)phenyl)ureido)methyl)phenyl)acetamide (source_name) BDBM518715 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q96GG9 DCUN1D1;DCN1;DCUN1L1;RP42;SCCRO
DCN1-like protein 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM518715 medium
; target=DCN1-like protein 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM518715 Open - 10.7270/Q2736V2B
PubChem CID126711173 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCCC(C)N1CCC(N(Cc2cccc(NC(=O)CCl)c2)C(=O)Nc2cccc(C(F)(F)F)c2)CC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB021684/BDB021684.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB021684/BDB021684.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB021684/BDB021684.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB021684/BDB021684.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB021684/BDB021684.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
DCN1-like protein 1
Q96GG9
E3 ligase component 		BindingDB:BDBM518715 IC50 95 nM High DOI: 10.7270/Q2736V2B 1