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BDBM518716

E3L021685
Internal ID: BDB021685
Activity data available Local docking-ready structure
Dock with Q96GG9
Structure
/e3_file/ligand_db/generated/BDB021685/BDB021685.sdf
Basic Properties
Compound ID
E3L021685
Internal ID
BDB021685
Molecular formula
C28H35F3N4O2
Molecular weight
516.608000
Exact mass
516.271211
XLogP
6.5170
TPSA
64.6800
HBA / HBD
3 / 2
Rotatable bonds
9
Heavy atoms / rings
37 / 3
Activity summary
IC50 unknown 111.00000000 nM
1 activity record(s) imported
InChIKey
LYYYSYJQVIOSIT-UHFFFAOYSA-N
SMILES
C=CC(=O)Nc1cccc(CN(C(=O)Nc2cccc(C(F)(F)F)c2)C2CCN(C(C)CCC)CC2)c1
Aliases
BDBM518716 (preferred) N-(3-((1-(1-(pentan-2-yl)piperidin-4-yl)-3-(3-(trifluoromethyl)phenyl)ureido)methyl)phenyl)acrylamide (source_name) BDBM518716 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q96GG9 DCUN1D1;DCN1;DCUN1L1;RP42;SCCRO
DCN1-like protein 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM518716 medium
; target=DCN1-like protein 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM518716 Open - 10.7270/Q2736V2B
PubChem CID126711573 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready C=CC(=O)Nc1cccc(CN(C(=O)Nc2cccc(C(F)(F)F)c2)C2CCN(C(C)CCC)CC2)c1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB021685/BDB021685.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB021685/BDB021685.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB021685/BDB021685.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB021685/BDB021685.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB021685/BDB021685.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
DCN1-like protein 1
Q96GG9
E3 ligase component 		BindingDB:BDBM518716 IC50 111 nM Moderate DOI: 10.7270/Q2736V2B 1