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US11116757, No. A108

E3L021734
Internal ID: BDB021734
Activity data available Local docking-ready structure
Dock with Q96GG9
Structure
/e3_file/ligand_db/generated/BDB021734/BDB021734.sdf
Basic Properties
Compound ID
E3L021734
Internal ID
BDB021734
Molecular formula
C25H33N5O
Molecular weight
419.573000
Exact mass
419.268511
XLogP
5.2500
TPSA
64.2600
HBA / HBD
3 / 2
Rotatable bonds
7
Heavy atoms / rings
31 / 4
Activity summary
IC50 unknown 2112.00000000 nM
1 activity record(s) imported
InChIKey
ZVSVQILSZUUIMZ-UHFFFAOYSA-N
SMILES
CCCC(C)N1CCC(N(Cc2ccccc2)C(=O)Nc2ccc3cn[nH]c3c2)CC1
Aliases
BDBM518812 (preferred) US11116757, No. A108 (source_name) BDBM518812 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q96GG9 DCUN1D1;DCN1;DCUN1L1;RP42;SCCRO
DCN1-like protein 1
reported_binder bindingdb_reported Yes No low BindingDB:BDBM518812 medium
; target=DCN1-like protein 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM518812 Open - 10.7270/Q2736V2B
PubChem CID126711579 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCCC(C)N1CCC(N(Cc2ccccc2)C(=O)Nc2ccc3cn[nH]c3c2)CC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB021734/BDB021734.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB021734/BDB021734.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB021734/BDB021734.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB021734/BDB021734.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB021734/BDB021734.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
DCN1-like protein 1
Q96GG9
E3 ligase component
BindingDB:BDBM518812 IC50 2112 nM Low DOI: 10.7270/Q2736V2B 1