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BDBM518818

E3L021740
Internal ID: BDB021740
Activity data available Local docking-ready structure
Dock with Q96GG9
Structure
/e3_file/ligand_db/generated/BDB021740/BDB021740.sdf
Basic Properties
Compound ID
E3L021740
Internal ID
BDB021740
Molecular formula
C25H29F4N3O3
Molecular weight
495.517000
Exact mass
495.214505
XLogP
5.8718
TPSA
54.0400
HBA / HBD
4 / 1
Rotatable bonds
7
Heavy atoms / rings
35 / 4
Activity summary
IC50 unknown 2353.00000000 nM
1 activity record(s) imported
InChIKey
NXSDYTQYZLZWMP-UHFFFAOYSA-N
SMILES
CCCCN1CCC(N(Cc2ccc3c(c2)OCO3)C(=O)Nc2ccc(F)c(C(F)(F)F)c2)CC1
Aliases
BDBM518818 (preferred) 1-(1,3-Benzodioxol-5-ylmethyl)-1-(1-butylpiperidin-4-yl)-3-[4-fluoro-3-(trifluoromethyl)phenyl]urea (source_name) BDBM518818 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q96GG9 DCUN1D1;DCN1;DCUN1L1;RP42;SCCRO
DCN1-like protein 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM518818 medium
; target=DCN1-like protein 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM518818 Open - 10.7270/Q2736V2B
PubChem CID126711338 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCCCN1CCC(N(Cc2ccc3c(c2)OCO3)C(=O)Nc2ccc(F)c(C(F)(F)F)c2)CC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB021740/BDB021740.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB021740/BDB021740.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB021740/BDB021740.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB021740/BDB021740.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB021740/BDB021740.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
DCN1-like protein 1
Q96GG9
E3 ligase component 		BindingDB:BDBM518818 IC50 2353 nM Low DOI: 10.7270/Q2736V2B 1