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US11161839, Example 3d

E3L022214
Internal ID: BDB022214
Activity data available Local docking-ready structure
Dock with P41182
Structure
/e3_file/ligand_db/generated/BDB022214/BDB022214.sdf
Basic Properties
Compound ID
E3L022214
Internal ID
BDB022214
Molecular formula
C24H25ClN6O2
Molecular weight
464.957000
Exact mass
464.172752
XLogP
4.0614
TPSA
111.8400
HBA / HBD
6 / 3
Rotatable bonds
6
Heavy atoms / rings
33 / 4
Activity summary
IC50 unknown 240.00000000 nM
2 activity record(s) imported
InChIKey
HFXLBWNSMJYTRE-CQSZACIVSA-N
SMILES
C[C@@H](Nc1cc(=O)n(C)c2ccc(Nc3ccnc(Cl)c3C#N)cc12)C(=O)NC1CCCC1
Aliases
BDBM522211 (preferred) US11161839, Example 3d (source_name) BDBM522211 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P41182 BCL6;BCL5;LAZ3;ZBTB27;ZNF51
B-cell lymphoma 6 protein		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM522211 medium
; target=B-cell lymphoma 6 protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM522211 Open - 10.7270/Q2320024
PubChem CID135386564 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready C[C@@H](Nc1cc(=O)n(C)c2ccc(Nc3ccnc(Cl)c3C#N)cc12)C(=O)NC1CCCC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB022214/BDB022214.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB022214/BDB022214.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB022214/BDB022214.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB022214/BDB022214.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB022214/BDB022214.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
B-cell lymphoma 6 protein
P41182
E3 ligase component 		BindingDB:BDBM522211 IC50 240 nM Moderate DOI: 10.7270/Q2320024 1
B-cell lymphoma 6 protein
P41182
E3 ligase component 		BindingDB:BDBM522211 IC50 245 nM Moderate DOI: 10.7270/Q2320024 1