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US11161839, Example 3k

E3L022228
Internal ID: BDB022228
Activity data available Local docking-ready structure
Dock with P41182
Structure
/e3_file/ligand_db/generated/BDB022228/BDB022228.sdf
Basic Properties
Compound ID
E3L022228
Internal ID
BDB022228
Molecular formula
C21H21ClN6O2
Molecular weight
424.892000
Exact mass
424.141452
XLogP
3.1387
TPSA
111.8400
HBA / HBD
6 / 3
Rotatable bonds
6
Heavy atoms / rings
30 / 3
Activity summary
IC50 unknown 676.00000000 nM
1 activity record(s) imported
InChIKey
SMPBOKOUEFIMJT-UHFFFAOYSA-N
SMILES
CCNC(=O)C(C)Nc1cc(=O)n(C)c2ccc(Nc3ccnc(Cl)c3C#N)cc12
Aliases
BDBM522225 (preferred) US11161839, Example 3k (source_name) BDBM522225 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P41182 BCL6;BCL5;LAZ3;ZBTB27;ZNF51
B-cell lymphoma 6 protein
reported_binder bindingdb_reported Yes No low BindingDB:BDBM522225 medium
; target=B-cell lymphoma 6 protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM522225 Open - 10.7270/Q2320024
PubChem CID142478379 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCNC(=O)C(C)Nc1cc(=O)n(C)c2ccc(Nc3ccnc(Cl)c3C#N)cc12 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB022228/BDB022228.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB022228/BDB022228.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB022228/BDB022228.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB022228/BDB022228.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB022228/BDB022228.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
B-cell lymphoma 6 protein
P41182
E3 ligase component
BindingDB:BDBM522225 IC50 676 nM Moderate DOI: 10.7270/Q2320024 1