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US11161839, Example 8a

E3L022259
Internal ID: BDB022259
Activity data available Local docking-ready structure
Dock with P41182
Structure
/e3_file/ligand_db/generated/BDB022259/BDB022259.sdf
Basic Properties
Compound ID
E3L022259
Internal ID
BDB022259
Molecular formula
C27H25ClN8O2
Molecular weight
529.004000
Exact mass
528.178900
XLogP
4.1853
TPSA
128.8300
HBA / HBD
8 / 2
Rotatable bonds
6
Heavy atoms / rings
38 / 5
Activity summary
IC50 unknown 17.00000000 nM
1 activity record(s) imported
InChIKey
MULJBGMEZYIOJT-UHFFFAOYSA-N
SMILES
Cn1c(=O)cc(NC(C)(C)c2ncccn2)c2cc(Nc3cc(C(=O)N4CCC4)nc(Cl)c3C#N)ccc21
Aliases
BDBM522256 (preferred) US11161839, Example 8a (source_name) BDBM522256 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P41182 BCL6;BCL5;LAZ3;ZBTB27;ZNF51
B-cell lymphoma 6 protein		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM522256 medium
; target=B-cell lymphoma 6 protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM522256 Open - 10.7270/Q2320024
PubChem CID135385473 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cn1c(=O)cc(NC(C)(C)c2ncccn2)c2cc(Nc3cc(C(=O)N4CCC4)nc(Cl)c3C#N)ccc21 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB022259/BDB022259.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB022259/BDB022259.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB022259/BDB022259.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB022259/BDB022259.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB022259/BDB022259.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
B-cell lymphoma 6 protein
P41182
E3 ligase component 		BindingDB:BDBM522256 IC50 17 nM High DOI: 10.7270/Q2320024 1