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US11161839, Example 8f

E3L022264
Internal ID: BDB022264
Activity data available Local docking-ready structure
Dock with P41182
Structure
/e3_file/ligand_db/generated/BDB022264/BDB022264.sdf
Basic Properties
Compound ID
E3L022264
Internal ID
BDB022264
Molecular formula
C30H26ClF3N8O2
Molecular weight
623.039000
Exact mass
622.181934
XLogP
5.6770
TPSA
128.8300
HBA / HBD
8 / 2
Rotatable bonds
7
Heavy atoms / rings
44 / 6
Activity summary
IC50 unknown 102.00000000 nM
1 activity record(s) imported
InChIKey
PVHIEWVDIHMCBD-UHFFFAOYSA-N
SMILES
CC(Nc1cc(=O)n(C)c2ccc(Nc3cc(C(=O)N4CC(C(F)(F)F)C4)nc(Cl)c3C#N)cc12)c1ncc(C2CC2)cn1
Aliases
BDBM522261 (preferred) US11161839, Example 8f (source_name) BDBM522261 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P41182 BCL6;BCL5;LAZ3;ZBTB27;ZNF51
B-cell lymphoma 6 protein		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM522261 medium
; target=B-cell lymphoma 6 protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM522261 Open - 10.7270/Q2320024
PubChem CID142478400 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC(Nc1cc(=O)n(C)c2ccc(Nc3cc(C(=O)N4CC(C(F)(F)F)C4)nc(Cl)c3C#N)cc12)c1ncc(C2CC2)cn1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB022264/BDB022264.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB022264/BDB022264.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB022264/BDB022264.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB022264/BDB022264.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB022264/BDB022264.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
B-cell lymphoma 6 protein
P41182
E3 ligase component 		BindingDB:BDBM522261 IC50 102 nM Moderate DOI: 10.7270/Q2320024 1