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US11161839, Example 11c

E3L022309
Internal ID: BDB022309
Activity data available Local docking-ready structure
Dock with P41182
Structure
/e3_file/ligand_db/generated/BDB022309/BDB022309.sdf
Basic Properties
Compound ID
E3L022309
Internal ID
BDB022309
Molecular formula
C25H25ClN8O2
Molecular weight
504.982000
Exact mass
504.178900
XLogP
3.4426
TPSA
129.6600
HBA / HBD
7 / 3
Rotatable bonds
7
Heavy atoms / rings
36 / 4
Activity summary
IC50 unknown 380.00000000 nM
1 activity record(s) imported
InChIKey
HQNKBMOECWKVPA-UHFFFAOYSA-N
SMILES
Cn1cc(CNC(=O)C(C)(C)Nc2cc(=O)n(C)c3ccc(Nc4ccnc(Cl)c4C#N)cc23)cn1
Aliases
BDBM522306 (preferred) US11161839, Example 11c (source_name) BDBM522306 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P41182 BCL6;BCL5;LAZ3;ZBTB27;ZNF51
B-cell lymphoma 6 protein		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM522306 medium
; target=B-cell lymphoma 6 protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM522306 Open - 10.7270/Q2320024
PubChem CID135385623 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cn1cc(CNC(=O)C(C)(C)Nc2cc(=O)n(C)c3ccc(Nc4ccnc(Cl)c4C#N)cc23)cn1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB022309/BDB022309.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB022309/BDB022309.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB022309/BDB022309.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB022309/BDB022309.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB022309/BDB022309.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
B-cell lymphoma 6 protein
P41182
E3 ligase component 		BindingDB:BDBM522306 IC50 380 nM Moderate DOI: 10.7270/Q2320024 1