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US11161839, Example 18a

E3L022357
Internal ID: BDB022357
Activity data available Local docking-ready structure
Dock with P41182
Structure
/e3_file/ligand_db/generated/BDB022357/BDB022357.sdf
Basic Properties
Compound ID
E3L022357
Internal ID
BDB022357
Molecular formula
C23H21N7O
Molecular weight
411.469000
Exact mass
411.180758
XLogP
3.8203
TPSA
108.5200
HBA / HBD
7 / 2
Rotatable bonds
5
Heavy atoms / rings
31 / 4
Activity summary
IC50 unknown 501.00000000 nM
1 activity record(s) imported
InChIKey
UAZSKPUFXSUDNI-UHFFFAOYSA-N
SMILES
Cc1nccc(Nc2ccc3c(c2)c(NC(C)c2ncccn2)cc(=O)n3C)c1C#N
Aliases
BDBM522354 (preferred) US11161839, Example 18a (source_name) BDBM522354 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P41182 BCL6;BCL5;LAZ3;ZBTB27;ZNF51
B-cell lymphoma 6 protein
reported_binder bindingdb_reported Yes No low BindingDB:BDBM522354 medium
; target=B-cell lymphoma 6 protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM522354 Open - 10.7270/Q2320024
PubChem CID135386505 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1nccc(Nc2ccc3c(c2)c(NC(C)c2ncccn2)cc(=O)n3C)c1C#N keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB022357/BDB022357.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB022357/BDB022357.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB022357/BDB022357.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB022357/BDB022357.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB022357/BDB022357.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
B-cell lymphoma 6 protein
P41182
E3 ligase component
BindingDB:BDBM522354 IC50 501 nM Moderate DOI: 10.7270/Q2320024 1