< Back to small molecule database

US11161839, Example 22a

E3L022369
Internal ID: BDB022369
Activity data available Local docking-ready structure
Dock with P41182
Structure
/e3_file/ligand_db/generated/BDB022369/BDB022369.sdf
Basic Properties
Compound ID
E3L022369
Internal ID
BDB022369
Molecular formula
C21H20ClN5O2
Molecular weight
409.877000
Exact mass
409.130553
XLogP
3.7915
TPSA
91.9700
HBA / HBD
6 / 2
Rotatable bonds
5
Heavy atoms / rings
29 / 4
Activity summary
IC50 unknown 251.00000000 nM
1 activity record(s) imported
InChIKey
PWPQABYRKAJTPI-VQIMIIECSA-N
SMILES
CO[C@@H]1CC[C@H]1Nc1cc(=O)n(C)c2ccc(Nc3ccnc(Cl)c3C#N)cc12
Aliases
BDBM522367 (preferred) US11161839, Example 22a (source_name) BDBM522367 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P41182 BCL6;BCL5;LAZ3;ZBTB27;ZNF51
B-cell lymphoma 6 protein
reported_binder bindingdb_reported Yes No low BindingDB:BDBM522367 medium
; target=B-cell lymphoma 6 protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM522367 Open - 10.7270/Q2320024
PubChem CID135386593 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CO[C@@H]1CC[C@H]1Nc1cc(=O)n(C)c2ccc(Nc3ccnc(Cl)c3C#N)cc12 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB022369/BDB022369.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB022369/BDB022369.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB022369/BDB022369.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB022369/BDB022369.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB022369/BDB022369.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
B-cell lymphoma 6 protein
P41182
E3 ligase component
BindingDB:BDBM522367 IC50 251 nM Moderate DOI: 10.7270/Q2320024 1