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US11161839, Example 23a

E3L022371
Internal ID: BDB022371
Activity data available Local docking-ready structure
Dock with P41182
Structure
/e3_file/ligand_db/generated/BDB022371/BDB022371.sdf
Basic Properties
Compound ID
E3L022371
Internal ID
BDB022371
Molecular formula
C23H23ClN6O3
Molecular weight
466.929000
Exact mass
466.152016
XLogP
3.1511
TPSA
121.0700
HBA / HBD
7 / 3
Rotatable bonds
6
Heavy atoms / rings
33 / 4
Activity summary
IC50 unknown 380.00000000 nM
2 activity record(s) imported
InChIKey
BAIZASZRQSZQOT-UHFFFAOYSA-N
SMILES
CNC(=O)c1cc(Nc2ccc3c(c2)c(NC2CCC2OC)cc(=O)n3C)c(C#N)c(Cl)n1
Aliases
BDBM522369 (preferred) US11161839, Example 23a (source_name) BDBM522369 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P41182 BCL6;BCL5;LAZ3;ZBTB27;ZNF51
B-cell lymphoma 6 protein		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM522369 medium
; target=B-cell lymphoma 6 protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM522369 Open - 10.7270/Q2320024
PubChem CID142478341 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CNC(=O)c1cc(Nc2ccc3c(c2)c(NC2CCC2OC)cc(=O)n3C)c(C#N)c(Cl)n1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB022371/BDB022371.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB022371/BDB022371.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB022371/BDB022371.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB022371/BDB022371.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB022371/BDB022371.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
B-cell lymphoma 6 protein
P41182
E3 ligase component 		BindingDB:BDBM522369 IC50 468 nM Moderate DOI: 10.7270/Q2320024 1
B-cell lymphoma 6 protein
P41182
E3 ligase component 		BindingDB:BDBM522369 IC50 380 nM Moderate DOI: 10.7270/Q2320024 1