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BDBM525335

E3L022404
Internal ID: BDB022404
Activity data available Local docking-ready structure
Dock with P51948
Structure
/e3_file/ligand_db/generated/BDB022404/BDB022404.sdf
Basic Properties
Compound ID
E3L022404
Internal ID
BDB022404
Molecular formula
C28H33N5O2
Molecular weight
471.605000
Exact mass
471.263425
XLogP
5.1427
TPSA
90.1200
HBA / HBD
4 / 3
Rotatable bonds
10
Heavy atoms / rings
35 / 4
Activity summary
IC50 unknown 62.00000000 nM
1 activity record(s) imported
InChIKey
SIGAKCXGEQAVJE-RMKNXTFCSA-N
SMILES
CCC(C(=O)Nc1cc(C2CC2)[nH]n1)c1cccc(-c2ccc(NC(=O)/C=C/CN(C)C)cc2)c1
Aliases
BDBM525335 (preferred) N-(5-cyclopropyl-1H-pyrazol-3-yl)-2-[3-[4-[[(E)-4-(dimethylamino)but-2-enoyl]amino]phenyl]phenyl]butanamide (source_name) BDBM525335 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P51948 MNAT1;CAP35;MAT1;RNF66
CDK-activating kinase assembly factor MAT1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM525335 medium
; target=Cyclin-H
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM525335 Open - 10.7270/Q2W66PXD
PubChem CID124111240 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCC(C(=O)Nc1cc(C2CC2)[nH]n1)c1cccc(-c2ccc(NC(=O)/C=C/CN(C)C)cc2)c1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB022404/BDB022404.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB022404/BDB022404.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB022404/BDB022404.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB022404/BDB022404.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB022404/BDB022404.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Cyclin-H
P51948
E3 ligase component 		BindingDB:BDBM525335 IC50 62 nM High DOI: 10.7270/Q2W66PXD 1