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US11174250, Example 102

E3L022584
Internal ID: BDB022584
Activity data available Local docking-ready structure
Dock with P61964
Structure
/e3_file/ligand_db/generated/BDB022584/BDB022584.sdf
Basic Properties
Compound ID
E3L022584
Internal ID
BDB022584
Molecular formula
C30H32F2N6O2
Molecular weight
546.622000
Exact mass
546.255481
XLogP
4.3444
TPSA
76.7300
HBA / HBD
6 / 2
Rotatable bonds
6
Heavy atoms / rings
40 / 6
Activity summary
Kd > 200.00000000 nM
1 activity record(s) imported
InChIKey
ZONWONWYQRHXFI-UHFFFAOYSA-N
SMILES
CN1CCN(c2ccc(-c3cc(CN4CCOCC4)ccc3F)cc2NC(=O)c2cc(F)cc3[nH]cnc23)CC1
Aliases
BDBM525684 (preferred) US11174250, Example 102 (source_name) BDBM525684 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P61964 WDR5;BIG3
WD repeat-containing protein 5
reported_binder bindingdb_reported Yes No low BindingDB:BDBM525684 medium
; target=WD repeat-containing protein 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM525684 Open - 10.7270/Q2C53Q0K
PubChem CID137376400 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN1CCN(c2ccc(-c3cc(CN4CCOCC4)ccc3F)cc2NC(=O)c2cc(F)cc3[nH]cnc23)CC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB022584/BDB022584.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB022584/BDB022584.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB022584/BDB022584.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB022584/BDB022584.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB022584/BDB022584.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 5
P61964
E3 ligase component
BindingDB:BDBM525684 Kd >200 nM Uncertain DOI: 10.7270/Q2C53Q0K 1