< Back to small molecule database

BDBM526538

E3L022611
Internal ID: BDB022611
Activity data available Local docking-ready structure
Dock with P51948
Structure
/e3_file/ligand_db/generated/BDB022611/BDB022611.sdf
Basic Properties
Compound ID
E3L022611
Internal ID
BDB022611
Molecular formula
C30H41N9O2
Molecular weight
559.719000
Exact mass
559.338322
XLogP
3.7290
TPSA
119.7900
HBA / HBD
8 / 3
Rotatable bonds
9
Heavy atoms / rings
41 / 5
Activity summary
IC50 < 300.00000000 nM
1 activity record(s) imported
InChIKey
HMAVGSMOAUBMJF-UHFFFAOYSA-N
SMILES
C=CC(=O)N1CCCC(C(=O)Nc2cccc(CNc3nc(NC4CCN(C)CC4)nc4c(C(C)C)cnn34)c2)C1
Aliases
BDBM526538 (preferred) 1-acryloyl-N-(3-(((8-isopropyl-2-((1-methylpiperidin-4-yl)amino)pyrazolo[1,5-a][1,3,5]triazin-4-yl)amino)methyl)phenyl)piperidine-3-carboxamide (source_name) BDBM526538 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P51948 MNAT1;CAP35;MAT1;RNF66
CDK-activating kinase assembly factor MAT1
reported_binder bindingdb_reported Yes No low BindingDB:BDBM526538 medium
; target=Cyclin-H
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM526538 Open - 10.7270/Q2Z03CCX
PubChem CID134281395 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready C=CC(=O)N1CCCC(C(=O)Nc2cccc(CNc3nc(NC4CCN(C)CC4)nc4c(C(C)C)cnn34)c2)C1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB022611/BDB022611.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB022611/BDB022611.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB022611/BDB022611.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB022611/BDB022611.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB022611/BDB022611.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Cyclin-H
P51948
E3 ligase component
BindingDB:BDBM526538 IC50 <300 nM Uncertain DOI: 10.7270/Q2Z03CCX 1